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LOC105376363 uncharacterized LOC105376363 [ Homo sapiens (human) ]

Gene ID: 105376363, updated on 17-Sep-2024

Summary

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Gene symbol
LOC105376363
Gene description
uncharacterized LOC105376363
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105376363 in Genome Data Viewer
Location:
10p15.2
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (3760302..3769320)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (3764174..3773217)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124902540 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr10:3796919-3798118 Neighboring gene uncharacterized LOC105376361 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2910 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2911 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr10:3804788-3805987 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr10:3808014-3809213 Neighboring gene Sharpr-MPRA regulatory region 3800 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:3823606-3824441 Neighboring gene KLF transcription factor 6 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2912 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2913 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr10:3825667-3826222 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:3826223-3826779 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:3826780-3827335 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2077 Neighboring gene KLF6-IV enhancer Neighboring gene KLF6-III enhancer Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:3847861-3848362 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:3848363-3848864 Neighboring gene uncharacterized LOC105376364

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    3760302..3769320
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001747332.1 RNA Sequence

  2. XR_001747331.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    3764174..3773217
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007080896.1 RNA Sequence

  2. XR_007080895.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Other Literature Sources
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Research Materials