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LOC105376304 uncharacterized LOC105376304 [ Homo sapiens (human) ]

Gene ID: 105376304, updated on 17-Sep-2024

Summary

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Gene symbol
LOC105376304
Gene description
uncharacterized LOC105376304
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105376304 in Genome Data Viewer
Location:
9q34.13
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (132410641..132416255)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (144625085..144630696)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr9:135144739-135145938 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:135171222-135171722 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:135171723-135172223 Neighboring gene senataxin Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29217 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr9:135229958-135231157 Neighboring gene Sharpr-MPRA regulatory region 6614 Neighboring gene uncharacterized LOC124902292 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29218 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29219 Neighboring gene transcription termination factor 1 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20431 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:135297649-135298150 Neighboring gene Sharpr-MPRA regulatory region 9749 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr9:135300191-135300691 Neighboring gene cilia and flagella associated protein 77 Neighboring gene RNA, U5D small nuclear 2, pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:135333137-135333638 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:135333639-135334138 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:135356467-135356968 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20432 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20433 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:135372743-135373244 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:135385275-135385814 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:135385815-135386352 Neighboring gene uncharacterized LOC124902293 Neighboring gene ReSE screen-validated silencer GRCh37_chr9:135406706-135406978

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    132410641..132416255
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_930405.2 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    144625085..144630696
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007080090.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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