U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC105376253 uncharacterized LOC105376253 [ Homo sapiens (human) ]

Gene ID: 105376253, updated on 17-Sep-2024

Summary

Go to the top of the page Help
Gene symbol
LOC105376253
Gene description
uncharacterized LOC105376253
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC105376253 in Genome Data Viewer
Location:
9q33.2
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (120322215..120366855, complement)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124902260 Neighboring gene microRNA 147a Neighboring gene MPRA-validated peak7326 silencer Neighboring gene ReSE screen-validated silencer GRCh37_chr9:123142787-123142995 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:123152383-123152883 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:123164680-123165648 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr9:123174184-123174980 Neighboring gene CDK5 regulatory subunit associated protein 2 Neighboring gene H3K27ac hESC enhancer GRCh37_chr9:123251855-123252356 Neighboring gene H3K27ac hESC enhancer GRCh37_chr9:123252357-123252856 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:123342117-123342679 Neighboring gene multiple EGF like domains 9 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20222 Neighboring gene NFE2L2 motif-containing MPRA enhancer 171 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr9:123455017-123455827 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20223

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_000009.12 Chromosome 9 Reference GRCh38.p14 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    120322215..120366855 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_002956934.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials