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LOC105376235 uncharacterized LOC105376235 [ Homo sapiens (human) ]

Gene ID: 105376235, updated on 17-Sep-2024

Summary

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Gene symbol
LOC105376235
Gene description
uncharacterized LOC105376235
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105376235 in Genome Data Viewer
Location:
9q33.1
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (115596683..115672828)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (127857479..127865914)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene deleted in esophageal cancer 1 Neighboring gene uncharacterized LOC105376233 Neighboring gene uncharacterized LOC105376232 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr9:118135173-118136372 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:118148123-118148622 Neighboring gene VISTA enhancer hs1625 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr9:118235041-118235822 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr9:118240508-118241287 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr9:118434360-118435559 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr9:118453216-118454415 Neighboring gene uncharacterized LOC124902356 Neighboring gene uncharacterized LOC101928775 Neighboring gene uncharacterized LOC105376234

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    115596683..115672828
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_930270.3 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    127857479..127865914
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007079956.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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