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LOC105376213 uncharacterized LOC105376213 [ Homo sapiens (human) ]

Gene ID: 105376213, updated on 17-Sep-2024

Summary

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Gene symbol
LOC105376213
Gene description
uncharacterized LOC105376213
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105376213 in Genome Data Viewer
Location:
9q31.2
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (108079929..108083476)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (120248455..120252002)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107987112 Neighboring gene uncharacterized LOC124902243 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr9:110779148-110780347 Neighboring gene uncharacterized LOC105376214 Neighboring gene NANOG hESC enhancer GRCh37_chr9:110814662-110815163 Neighboring gene ribosomal protein L31 pseudogene 43 Neighboring gene coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 2 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_104415 Neighboring gene uncharacterized LOC105376212 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr9:111044856-111046055

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    108079929..108083476
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_930237.3 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    120248455..120252002
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007079919.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
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