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LOC105376193 uncharacterized LOC105376193 [ Homo sapiens (human) ]

Gene ID: 105376193, updated on 22-Oct-2024

Summary

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Gene symbol
LOC105376193
Gene description
uncharacterized LOC105376193
See related
Ensembl:ENSG00000270332
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105376193 in Genome Data Viewer
Location:
9q31.1
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (103956315..104001656, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (116130079..116175413, complement)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene RNA, 5S ribosomal pseudogene 291 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr9:106477063-106477652 Neighboring gene uncharacterized LOC105376192 Neighboring gene long intergenic non-protein coding RNA 3094 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:106855873-106856542 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:106856543-106857210 Neighboring gene SMC2 divergent transcript Neighboring gene structural maintenance of chromosomes 2 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr9:106994559-106995758 Neighboring gene uncharacterized LOC105376194 Neighboring gene topoisomerase I binding, arginine and serine rich like, pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    103956315..104001656 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_930195.2 RNA Sequence

  2. XR_930194.2 RNA Sequence

    Related
    ENST00000773575.1

  3. XR_930196.2 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    116130079..116175413 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007079821.1 RNA Sequence

  2. XR_007079819.1 RNA Sequence

  3. XR_007079820.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials