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LOC105376182 uncharacterized LOC105376182 [ Homo sapiens (human) ]

Gene ID: 105376182, updated on 17-Sep-2024

Summary

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Gene symbol
LOC105376182
Gene description
uncharacterized LOC105376182
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105376182 in Genome Data Viewer
Location:
9q31.1
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (101226809..101243259, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (113398785..113415235, complement)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene phospholipid phosphatase related 1 Neighboring gene TRPC6 pseudogene 4 Neighboring gene uncharacterized LOC105376183 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:104031576-104032313 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr9:104032314-104033050 Neighboring gene Sharpr-MPRA regulatory region 15176 Neighboring gene uncharacterized LOC124902238 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:104096025-104096526 Neighboring gene acyl-CoA:amino acid N-acyltransferase, pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    101226809..101243259 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_930182.3 RNA Sequence

  2. XR_001746858.2 RNA Sequence

Reference GRCh38.p14 ALT_REF_LOCI_1

Genomic

  1. NT_187578.1 Reference GRCh38.p14 ALT_REF_LOCI_1

    Range
    278012..294462 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_951775.3 RNA Sequence

  2. XR_001756323.2 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    113398785..113415235 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007079812.1 RNA Sequence

  2. XR_007079811.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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