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LOC105375864 uncharacterized LOC105375864 [ Homo sapiens (human) ]

Gene ID: 105375864, updated on 17-Sep-2024

Summary

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Gene symbol
LOC105375864
Gene description
uncharacterized LOC105375864
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105375864 in Genome Data Viewer
Location:
8q12.1
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (60284965..60364087, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (60709038..60787862, complement)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene SLC2A13 pseudogene 1 Neighboring gene carbonic anhydrase 8 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:61193435-61193941 Neighboring gene ReSE screen-validated silencer GRCh37_chr8:61193934-61194142 Neighboring gene CRISPRi-validated cis-regulatory element chr8.1767 Neighboring gene CRISPRi-validated cis-regulatory element chr8.1768 Neighboring gene CRISPRi-validated cis-regulatory element chr8.1769 Neighboring gene ReSE screen-validated silencer GRCh37_chr8:61286725-61286971 Neighboring gene PDCL3 pseudogene 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27421 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27422 Neighboring gene long intergenic non-protein coding RNA 1301

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    60284965..60364087 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001745925.1 RNA Sequence

  2. XR_007060920.1 RNA Sequence

  3. XR_007060921.1 RNA Sequence

  4. XR_007060919.1 RNA Sequence

  5. XR_001745923.1 RNA Sequence

  6. XR_928940.2 RNA Sequence

  7. XR_928938.2 RNA Sequence

  8. XR_928941.2 RNA Sequence

  9. XR_928937.2 RNA Sequence

  10. XR_928936.2 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    60709038..60787862 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007079033.1 RNA Sequence

  2. XR_007079030.1 RNA Sequence

  3. XR_007079031.1 RNA Sequence

  4. XR_007079026.1 RNA Sequence

  5. XR_007079027.1 RNA Sequence

  6. XR_007079032.1 RNA Sequence

  7. XR_007079028.1 RNA Sequence

  8. XR_007079034.1 RNA Sequence

  9. XR_007079029.1 RNA Sequence

  10. XR_007079025.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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