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LOC105375784 uncharacterized LOC105375784 [ Homo sapiens (human) ]

Gene ID: 105375784, updated on 17-Sep-2024

Summary

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Gene symbol
LOC105375784
Gene description
uncharacterized LOC105375784
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105375784 in Genome Data Viewer
Location:
8q24.3
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (141058257..141062493)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (142178346..142182581)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:142033039-142033749 Neighboring gene uncharacterized LOC105375783 Neighboring gene H3K27ac-H3K4me1 hESC enhancers GRCh37_chr8:142036197-142037048 and GRCh37_chr8:142037049-142037899 Neighboring gene uncharacterized LOC124902030 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:142047320-142047944 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:142047945-142048570 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:142048571-142049195 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:142051549-142052338 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:142069799-142070496 Neighboring gene H3K27ac hESC enhancer GRCh37_chr8:142077205-142077706 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:142082933-142083432 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:142083433-142084432 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:142084444-142085234 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:142085235-142086025 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19587 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19588 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28039 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:142097256-142097756 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28040 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28041 Neighboring gene ReSE screen-validated silencer GRCh37_chr8:142104647-142104880 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:142105126-142106125 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:142114470-142115018 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:142115019-142115566 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28042 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:142121985-142122506 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:142122507-142123026 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28043 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28044 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:142128597-142129165 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28045 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:142137284-142138115 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:142138949-142139779 Neighboring gene DENND3 antisense RNA 1 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:142144757-142145375 Neighboring gene DENN domain containing 3 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:142163840-142164798 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:142167099-142167874 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28046 Neighboring gene Sharpr-MPRA regulatory region 5779 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:142183015-142183516 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:142183517-142184016 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28047 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28048 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:142191187-142191687 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28049 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28050 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28051 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:142194501-142195455 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:142202224-142202724 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:142202725-142203225 Neighboring gene uncharacterized LOC105375785

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    141058257..141062493
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_002956733.2 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    142178346..142182581
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007079469.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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