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LINC03044 long intergenic non-protein coding RNA 3044 [ Homo sapiens (human) ]

Gene ID: 105375674, updated on 10-Oct-2023

Summary

Official Symbol
LINC03044provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 3044provided by HGNC
Primary source
HGNC:HGNC:56250
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
Lnc524369
Expression
Low expression observed in reference dataset See more
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Genomic context

See LINC03044 in Genome Data Viewer
Location:
8q22.3
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (101120432..101126619, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (102246195..102252353, complement)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC401471 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr8:102038939-102040138 Neighboring gene STAT1 regulated ILF2 complex interacting lncRNA Neighboring gene Sharpr-MPRA regulatory region 4389 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19429 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:102109675-102110204 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:102110205-102110732 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:102120910-102121840 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:102121841-102122769 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:102138473-102138995 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:102138996-102139519 Neighboring gene long intergenic non-protein coding RNA 3090 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:102149216-102149811 Neighboring gene RN7SK pseudogene 249 Neighboring gene uncharacterized LOC105375676

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_187481.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AP003469

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    101120432..101126619 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    102246195..102252353 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)