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LOC105375597 uncharacterized LOC105375597 [ Homo sapiens (human) ]

Gene ID: 105375597, updated on 17-Sep-2024

Summary

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Gene symbol
LOC105375597
Gene description
uncharacterized LOC105375597
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105375597 in Genome Data Viewer
Location:
7q36.3
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (156012681..156033398)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (157199664..157220385)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124901788 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr7:155743904-155745103 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:155745489-155745989 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:155747182-155747910 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr7:155754590-155755789 Neighboring gene uncharacterized LOC389602 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:155766793-155767294 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:155767295-155767794 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26905 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:155790505-155791005 Neighboring gene ReSE screen-validated silencer GRCh37_chr7:155815211-155815389 Neighboring gene uncharacterized LOC124901789 Neighboring gene MPRA-validated peak6866 silencer Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26906 Neighboring gene SHH silencer LOC106049962 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr7:155855824-155857023 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr7:155857309-155858508 Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:155884497-155884996 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:155898353-155899150 Neighboring gene uncharacterized LOC105375603 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:155936145-155936722 Neighboring gene uncharacterized LOC105375602

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    156012681..156033398
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_928242.3 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    157199664..157220385
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007078047.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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