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LOC105375570 uncharacterized LOC105375570 [ Homo sapiens (human) ]

Gene ID: 105375570, updated on 17-Sep-2024

Summary

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Gene symbol
LOC105375570
Gene description
uncharacterized LOC105375570
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105375570 in Genome Data Viewer
Location:
7q36.1
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (151946929..151954922, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (153119911..153127870, complement)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene protein kinase AMP-activated non-catalytic subunit gamma 2 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18828 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:151584831-151585642 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:151585643-151586454 Neighboring gene PRKAG2 antisense RNA 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:151587423-151587923 Neighboring gene MPRA-validated peak6849 silencer Neighboring gene RNA, U6 small nuclear 604, pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26873 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26874 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26875 Neighboring gene MPRA-validated peak6850 silencer Neighboring gene uncharacterized LOC105375571 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:151685205-151685733 Neighboring gene polypeptide N-acetylgalactosaminyltransferase like 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    151946929..151954922 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007060597.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    153119911..153127870 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007078016.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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