U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC105375378 uncharacterized LOC105375378 [ Homo sapiens (human) ]

Gene ID: 105375378, updated on 17-Sep-2024

Summary

Go to the top of the page Help
Gene symbol
LOC105375378
Gene description
uncharacterized LOC105375378
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC105375378 in Genome Data Viewer
Location:
7q21.11
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (83471733..83482249, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (84721913..84732499, complement)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene piccolo presynaptic cytomatrix protein Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:82653064-82653634 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:82653635-82654203 Neighboring gene RNA, 5S ribosomal pseudogene 235 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18336 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26214 Neighboring gene uncharacterized LOC105375377 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr7:82833944-82834566 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr7:82840511-82841088 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr7:82841089-82841665 Neighboring gene semaphorin 3E Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr7:83088278-83089221 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:83089222-83090164 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr7:83093938-83094880 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26215 Neighboring gene NANOG hESC enhancer GRCh37_chr7:83126208-83126709 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr7:83314287-83314786 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:83315470-83315977 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:83320326-83320837 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr7:83322516-83323158 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr7:83337804-83339003 Neighboring gene RAD23B pseudogene 2 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26216 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26217 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr7:83463173-83463673 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18337 Neighboring gene uncharacterized LOC107986745

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    83471733..83482249 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_927716.3 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    84721913..84732499 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007077668.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials