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LOC105375202 uncharacterized LOC105375202 [ Homo sapiens (human) ]

Gene ID: 105375202, updated on 17-Sep-2024

Summary

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Gene symbol
LOC105375202
Gene description
uncharacterized LOC105375202
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105375202 in Genome Data Viewer
Location:
7p15.2
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (26428994..26433470)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (26564679..26566323)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18036 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18037 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25788 Neighboring gene ribosomal protein L23 pseudogene 7 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:26341907-26342408 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:26342409-26342908 Neighboring gene sorting nexin 10 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:26375053-26375568 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:26385227-26386154 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25789 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18038 Neighboring gene SNX10 antisense RNA 1 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:26437325-26438281 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18040 Neighboring gene long intergenic non-protein coding RNA 2981 Neighboring gene NANOG hESC enhancer GRCh37_chr7:26455397-26455952 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:26480672-26481247 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:26481248-26481822 Neighboring gene VISTA enhancer hs769 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:26547862-26548362 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:26548363-26548863 Neighboring gene uncharacterized LOC124901605 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr7:26589438-26590637 Neighboring gene KIAA0087 lncRNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    26428994..26433470
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_927126.3 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    26564679..26566323
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007078356.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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