U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC105375081 uncharacterized LOC105375081 [ Homo sapiens (human) ]

Gene ID: 105375081, updated on 10-Oct-2023

Summary

Go to the top of the page Help
Gene symbol
LOC105375081
Gene description
uncharacterized LOC105375081
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in urinary bladder (RPKM 3.6) and stomach (RPKM 0.8) See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
6p12.3
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (47129710..47138696, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (46966875..46975858, complement)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124901489 Neighboring gene H3K27ac hESC enhancer GRCh37_chr6:46952137-46952638 Neighboring gene adhesion G protein-coupled receptor F1 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr6:47011981-47013180 Neighboring gene MPRA-validated peak5829 silencer Neighboring gene Sharpr-MPRA regulatory region 10363 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_92032 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24655 Neighboring gene MPRA-validated peak5831 silencer Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24656 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24657 Neighboring gene TNF receptor superfamily member 21 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr6:47252971-47254170 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24658 Neighboring gene H3K27ac hESC enhancer GRCh37_chr6:47276592-47277314 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24659 Neighboring gene Sharpr-MPRA regulatory region 4111 Neighboring gene NANOG hESC enhancer GRCh37_chr6:47306925-47307426 Neighboring gene B3GNTL1 pseudogene 2

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    47129710..47138696 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_926864.3 RNA Sequence

  2. XR_001744148.2 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    46966875..46975858 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007076817.1 RNA Sequence

  2. XR_007076818.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases