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LOC105374914 uncharacterized LOC105374914 [ Homo sapiens (human) ]

Gene ID: 105374914, updated on 17-Sep-2024

Summary

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Gene symbol
LOC105374914
Gene description
uncharacterized LOC105374914
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105374914 in Genome Data Viewer
Location:
6p24.3
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (8959908..9051662)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (8829333..8921117)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100506207 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_96605 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_96748 Neighboring gene hepatocellular carcinoma up-regulated long non-coding RNA Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_96779 Neighboring gene uncharacterized LOC112267952 Neighboring gene Sharpr-MPRA regulatory region 5599 Neighboring gene VISTA enhancer hs1315 Neighboring gene uncharacterized LOC107986562 Neighboring gene NANOG hESC enhancer GRCh37_chr6:9199635-9200136 Neighboring gene uncharacterized LOC124901255

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    8959908..9051662
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001743953.1 RNA Sequence

  2. XR_001743952.1 RNA Sequence

  3. XR_001743951.1 RNA Sequence

  4. XR_001743954.1 RNA Sequence

  5. XR_001743955.1 RNA Sequence

  6. XR_926450.3 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    8829333..8921117
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007076511.1 RNA Sequence

  2. XR_007076510.1 RNA Sequence

  3. XR_007076509.1 RNA Sequence

  4. XR_007076513.1 RNA Sequence

  5. XR_007076512.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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