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LOC105374681 uncharacterized LOC105374681 [ Homo sapiens (human) ]

Gene ID: 105374681, updated on 17-Sep-2024

Summary

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Gene symbol
LOC105374681
Gene description
uncharacterized LOC105374681
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105374681 in Genome Data Viewer
Location:
5p14.3
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (22573706..22589298)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (22681395..22696987)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene cadherin 12 Neighboring gene uncharacterized LOC105374682 Neighboring gene pro-melanin concentrating hormone like 1 (pseudogene) Neighboring gene MED14-independent group 3 enhancer GRCh37_chr5:22473807-22475006 Neighboring gene ReSE screen-validated silencer GRCh37_chr5:22480518-22480675 Neighboring gene glucosaminyl (N-acetyl) transferase 1, core 2 pseudogene 2 Neighboring gene ReSE screen-validated silencer GRCh37_chr5:22744411-22744586 Neighboring gene uncharacterized LOC101929617 Neighboring gene NANOG hESC enhancer GRCh37_chr5:22835757-22836258 Neighboring gene uncharacterized LOC105374686 Neighboring gene Sharpr-MPRA regulatory region 1276

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    22573706..22589298
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_925843.3 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    22681395..22696987
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007075536.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Research Materials