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EIF2B5-DT EIF2B5 divergent transcript [ Homo sapiens (human) ]

Gene ID: 105374249, updated on 10-Oct-2023

Summary

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Official Symbol
EIF2B5-DTprovided by HGNC
Official Full Name
EIF2B5 divergent transcriptprovided by HGNC
Primary source
HGNC:HGNC:55202
See related
AllianceGenome:HGNC:55202
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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Location:
3q27.1
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (184131195..184135261, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (186940744..186944810, complement)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene HTR3E antisense RNA 1 Neighboring gene 5-hydroxytryptamine receptor 3E Neighboring gene heat shock protein 90 alpha family class A member 5, pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:183851535-183852176 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20901 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14954 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20902 Neighboring gene eukaryotic translation initiation factor 2B subunit epsilon Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14955 Neighboring gene ribosomal protein S3 pseudogene 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_183718.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC131235

  2. NR_183719.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC131235

  3. NR_183720.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC131235

  4. NR_183721.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC131235

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    184131195..184135261 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    186940744..186944810 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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