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LOC105373992 uncharacterized LOC105373992 [ Homo sapiens (human) ]

Gene ID: 105373992, updated on 22-Oct-2024

Summary

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Gene symbol
LOC105373992
Gene description
uncharacterized LOC105373992
See related
Ensembl:ENSG00000296251
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105373992 in Genome Data Viewer
Location:
3q11.2
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (94648085..94655939)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (97346538..97355824)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20125 Neighboring gene RBBP4 pseudogene 2 Neighboring gene NOP2/Sun RNA methyltransferase 3 Neighboring gene VISTA enhancer hs1462 Neighboring gene armadillo repeat containing 10 pseudogene 1 Neighboring gene H3K27ac hESC enhancer GRCh37_chr3:94362039-94362654 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:94464607-94465130 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:94593556-94594056 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr3:94656674-94657873 Neighboring gene long intergenic non-protein coding RNA 879 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr3:94722999-94723582 Neighboring gene WD repeat domain 82 pseudogene 1 Neighboring gene NANOG hESC enhancer GRCh37_chr3:94755350-94755877 Neighboring gene ribosomal protein S18 pseudogene 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    94648085..94655939
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_924224.2 RNA Sequence

  2. XR_924225.2 RNA Sequence

    Related
    ENST00000737632.1

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    97346538..97355824
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007074146.1 RNA Sequence

  2. XR_007074145.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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Research Materials