U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LINC01937 long intergenic non-protein coding RNA 1937 [ Homo sapiens (human) ]

Gene ID: 105373962, updated on 10-Oct-2023

Summary

Go to the top of the page Help
Official Symbol
LINC01937provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 1937provided by HGNC
Primary source
HGNC:HGNC:52760
See related
AllianceGenome:HGNC:52760
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LINC01937 in Genome Data Viewer
Location:
2q37.3
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (238719989..238744126)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (239210202..239234298)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 1107 Neighboring gene uncharacterized LOC124906130 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:239464607-239465108 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:239508477-239508992 Neighboring gene MPRA-validated peak4103 silencer Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:239547211-239547712 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr2:239565991-239566613 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr2:239592463-239593662 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:239605714-239606214 Neighboring gene uncharacterized LOC105373963 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:239639105-239639604 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:239680495-239680995 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:239684240-239684740 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:239684741-239685241 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:239692129-239692632 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr2:239710917-239712116 Neighboring gene uncharacterized LOC124905451 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_57404 Neighboring gene uncharacterized LOC100287387 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:239754662-239755172 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:239755173-239755683

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See variants in ClinVar

See studies and variants in dbVar

Genotypes

General gene information

Go to the top of the page Help

Clone Names

  • AC113618.1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    238719989..238744126
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_924050.2 RNA Sequence

  2. XR_007088244.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    239210202..239234298
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007072990.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases