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UBE2E3-DT UBE2E3 divergent transcript [ Homo sapiens (human) ]

Gene ID: 105373772, updated on 10-Oct-2023

Summary

Official Symbol
UBE2E3-DTprovided by HGNC
Official Full Name
UBE2E3 divergent transcriptprovided by HGNC
Primary source
HGNC:HGNC:40599
See related
AllianceGenome:HGNC:40599
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See UBE2E3-DT in Genome Data Viewer
Location:
2q31.3
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (180977330..180981012, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (181466970..181470652, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene SWI/SNF complex antagonist associated with prostate cancer 1 Neighboring gene ferritin heavy chain 1 pseudogene 20 Neighboring gene ribosomal protein L27a pseudogene 3 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 12155 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16822 Neighboring gene ubiquitin conjugating enzyme E2 E3 Neighboring gene uncharacterized LOC107985831 Neighboring gene NANOG hESC enhancer GRCh37_chr2:181971702-181972203 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16823 Neighboring gene long intergenic non-protein coding RNA 1934 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16824 Neighboring gene microRNA 4437

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_187176.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC104076

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    180977330..180981012 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    181466970..181470652 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)