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LOC105373727 uncharacterized LOC105373727 [ Homo sapiens (human) ]

Gene ID: 105373727, updated on 17-Sep-2024

Summary

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Gene symbol
LOC105373727
Gene description
uncharacterized LOC105373727
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105373727 in Genome Data Viewer
Location:
2q24.3
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (163259324..163329419)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (163716624..163786719)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene potassium voltage-gated channel subfamily H member 7 Neighboring gene KCNH7 antisense RNA 1 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:163721091-163721592 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:163721593-163722092 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_55438 Neighboring gene Sharpr-MPRA regulatory region 11367 Neighboring gene ribosomal protein L7 pseudogene 61 Neighboring gene RNA, U6 small nuclear 627, pseudogene Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_55575 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:164204489-164205088 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_55577 Neighboring gene uncharacterized LOC107985829 Neighboring gene ReSE screen-validated silencer GRCh37_chr2:164304809-164304985 Neighboring gene uncharacterized LOC105373728 Neighboring gene VISTA enhancer hs170 Neighboring gene NANOG hESC enhancer GRCh37_chr2:164478034-164478535 Neighboring gene Sharpr-MPRA regulatory region 10417 Neighboring gene uncharacterized LOC107985957 Neighboring gene VISTA enhancer hs640 Neighboring gene fidgetin, microtubule severing factor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    163259324..163329419
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_923547.2 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    163716624..163786719
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007073026.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials