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LOC105373397 uncharacterized LOC105373397 [ Homo sapiens (human) ]

Gene ID: 105373397, updated on 17-Sep-2024

Summary

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Gene symbol
LOC105373397
Gene description
uncharacterized LOC105373397
Gene type
protein coding
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105373397 in Genome Data Viewer
Location:
2p25.3
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (4096389..4114721)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (4119770..4138095)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105373394 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr2:4033381-4034580 Neighboring gene uncharacterized LOC105373395 Neighboring gene uncharacterized LOC107985841 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_58486 Neighboring gene ReSE screen-validated silencer GRCh37_chr2:4241556-4242093 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr2:4268419-4269618 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr2:4293747-4294616 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr2:4428368-4429086 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr2:4429087-4429804 Neighboring gene NANOG hESC enhancer GRCh37_chr2:4437428-4437943 Neighboring gene nucleophosmin 1 pseudogene 48

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

General protein information

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Preferred Names
uncharacterized protein LOC105373397

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    4096389..4114721
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047446544.1 → XP_047302500.1  uncharacterized protein LOC105373397

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    4119770..4138095
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047443951.1 → XP_047299907.1  uncharacterized protein LOC105373397

Nucleotide Protein
Heading Accession and Version

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