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LOC105373061 uncharacterized LOC105373061 [ Homo sapiens (human) ]

Gene ID: 105373061, updated on 17-Sep-2024

Summary

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Gene symbol
LOC105373061
Gene description
uncharacterized LOC105373061
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105373061 in Genome Data Viewer
Location:
1q42.11
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (224058866..224073248)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (223248601..223262505)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene general transcription factor IIi pseudogene 20 Neighboring gene RNA, U6 small nuclear 1319, pseudogene Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:224180107-224180730 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:224180731-224181352 Neighboring gene septin 7 pseudogene 13 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr1:224199262-224199956 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr1:224199957-224200650 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2593 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2594 Neighboring gene uncharacterized LOC105373056 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2595 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2596 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2597 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2598 Neighboring gene RN7SK pseudogene 49 Neighboring gene F-box protein 28 Neighboring gene UPF0764 protein C16orf89-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    224058866..224073248
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001737824.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    223248601..223262505
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007071120.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Research Materials