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LOC105372991 uncharacterized LOC105372991 [ Homo sapiens (human) ]

Gene ID: 105372991, updated on 17-Sep-2024

Summary

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Gene symbol
LOC105372991
Gene description
uncharacterized LOC105372991
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in bone marrow (RPKM 1.5) and liver (RPKM 0.1) See more
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Genomic context

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See LOC105372991 in Genome Data Viewer
Location:
22q12.2
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 22 NC_000022.11 (30447960..30452774)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 22 NC_060946.1 (30911298..30916115)

Chromosome 22 - NC_000022.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105372990 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:30831805-30832326 Neighboring gene SLC39A1 pseudogene 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 18838 Neighboring gene Sharpr-MPRA regulatory region 4237 Neighboring gene ReSE screen-validated silencer GRCh37_chr22:30846973-30847332 Neighboring gene SEC14 like lipid binding 3 Neighboring gene uncharacterized LOC107985579 Neighboring gene syndecan 4 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

General gene information

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Homology

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000022.11 Reference GRCh38.p14 Primary Assembly

    Range
    30447960..30452774
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001755491.2 RNA Sequence

  2. XR_007068061.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060946.1 Alternate T2T-CHM13v2.0

    Range
    30911298..30916115
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007090587.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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