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LOC105372892 uncharacterized LOC105372892 [ Homo sapiens (human) ]

Gene ID: 105372892, updated on 17-Sep-2024

Summary

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Gene symbol
LOC105372892
Gene description
uncharacterized LOC105372892
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105372892 in Genome Data Viewer
Location:
1q32.2
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (208671347..208728415, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (207918168..207975255, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_1994 Neighboring gene Neanderthal introgressed variant-containing enhancers experimental_2023 and experimental_2030 Neighboring gene long intergenic non-protein coding RNA 1735 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_2148 Neighboring gene long intergenic non-protein coding RNA 2769 Neighboring gene ReSE screen-validated silencer GRCh37_chr1:208825704-208825890 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_2240 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_2254 Neighboring gene ribosomal protein S26 pseudogene 13 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_2323 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_2353 Neighboring gene long intergenic non-protein coding RNA 1717 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_2428 Neighboring gene uncharacterized LOC107985255 Neighboring gene long intergenic non-protein coding RNA 1774

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    208671347..208728415 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007066854.1 RNA Sequence

  2. XR_001738436.2 RNA Sequence

  3. XR_007066856.1 RNA Sequence

  4. XR_007066862.1 RNA Sequence

  5. XR_007066861.1 RNA Sequence

  6. XR_001738435.2 RNA Sequence

  7. XR_001738434.2 RNA Sequence

  8. XR_001738432.2 RNA Sequence

  9. XR_007066863.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    207918168..207975255 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007071046.1 RNA Sequence

  2. XR_007071045.1 RNA Sequence

  3. XR_007071047.1 RNA Sequence

  4. XR_007071049.1 RNA Sequence

  5. XR_007071048.1 RNA Sequence

  6. XR_007071053.1 RNA Sequence

  7. XR_007071050.1 RNA Sequence

  8. XR_007071052.1 RNA Sequence

  9. XR_007071051.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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