U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC105372858 uncharacterized LOC105372858 [ Homo sapiens (human) ]

Gene ID: 105372858, updated on 17-Sep-2024

Summary

Go to the top of the page Help
Gene symbol
LOC105372858
Gene description
uncharacterized LOC105372858
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC105372858 in Genome Data Viewer
Location:
22q11.21
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 22 NC_000022.11 (18209155..18211924)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 22 NC_060946.1 (18881524..18884293)

Chromosome 22 - NC_000022.11Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 18653 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 18654 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:18638089-18638590 Neighboring gene ubiquitin specific peptidase 18 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:18647775-18648464 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr22:18648465-18649153 Neighboring gene family with sequence similarity 230 member D Neighboring gene OCT4 hESC enhancer GRCh37_chr22:18685927-18686428 Neighboring gene protein phosphatase 1 regulatory subunit 26-like Neighboring gene uncharacterized LOC105379518

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000022.11 Reference GRCh38.p14 Primary Assembly

    Range
    18209155..18211924
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001755425.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060946.1 Alternate T2T-CHM13v2.0

    Range
    18881524..18884293
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007090428.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials