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LOC105372202 uncharacterized LOC105372202 [ Homo sapiens (human) ]

Gene ID: 105372202, updated on 26-Oct-2024

Summary

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Gene symbol
LOC105372202
Gene description
uncharacterized LOC105372202
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105372202 in Genome Data Viewer
Location:
18q23
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 18 NC_000018.10 (75506209..75510005, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 18 NC_060942.1 (75735530..75739301, complement)

Chromosome 18 - NC_000018.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124900405 Neighboring gene uncharacterized LOC107985177 Neighboring gene uncharacterized LOC105372201 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr18:73201370-73202569 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr18:73222091-73222736 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr18:73294662-73295162 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr18:73295163-73295663 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr18:73337297-73338496 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr18:73350103-73350680 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr18:73350681-73351256 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr18:73405045-73405636 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr18:73405637-73406228 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr18:73423789-73424988 Neighboring gene long intergenic non-protein coding RNA 1898 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr18:73513709-73514215 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr18:73558425-73559064 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr18:73559065-73559702 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr18:73616131-73616632 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr18:73649128-73649670 Neighboring gene H3K27ac hESC enhancer GRCh37_chr18:73650329-73650828 Neighboring gene uncharacterized LOC105372203

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000018.10 Reference GRCh38.p14 Primary Assembly

    Range
    75506209..75510005 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_935640.3 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060942.1 Alternate T2T-CHM13v2.0

    Range
    75735530..75739301 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007088164.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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