U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC105371926 uncharacterized LOC105371926 [ Homo sapiens (human) ]

Gene ID: 105371926, updated on 17-Jun-2024

Summary

Go to the top of the page Help
Gene symbol
LOC105371926
Gene description
uncharacterized LOC105371926
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Annotation information
Annotation category: only annotated on patches unit in reference assembly
Expression
Biased expression in gall bladder (RPKM 2.4), bone marrow (RPKM 0.9) and 4 other tissues See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC105371926 in Genome Data Viewer
Location:
17q25.3
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 17 (PATCHES) NW_025791805.1 (109433..113664, complement)

NW_025791805.1Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12963 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:79376071-79376596 Neighboring gene BAH domain and coiled-coil containing 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:79379388-79379942 Neighboring gene microRNA 4740 Neighboring gene Sharpr-MPRA regulatory region 9433 Neighboring gene ReSE screen-validated silencer GRCh37_chr17:79386221-79386468 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:79386861-79387562 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:79390656-79391605 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:79422900-79423848 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:79423849-79424797 Neighboring gene microRNA 3186 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:79438477-79438978 Neighboring gene CRISPRi-validated cis-regulatory element chr17.6006 Neighboring gene long intergenic non-protein coding RNA 1971 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 9127 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:79455547-79456267 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:79456989-79457708 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:79460397-79460898 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:79466919-79467642 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12964 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 9128 Neighboring gene actin gamma 1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_025791805.1 Chromosome 17 Reference GRCh38.p14 PATCHES

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

Variation

Go to the top of the page Help

See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_025791805.1 Reference GRCh38.p14 PATCHES

    Range
    109433..113664 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007069576.1 RNA Sequence

  2. XR_007069575.1 RNA Sequence

  3. XR_935043.3 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials