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LOC105370502 uncharacterized LOC105370502 [ Homo sapiens (human) ]

Gene ID: 105370502, updated on 10-Oct-2023

Summary

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Gene symbol
LOC105370502
Gene description
uncharacterized LOC105370502
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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Location:
14q22.1
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 14 NC_000014.9 (53169014..53242470)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 14 NC_060938.1 (47376754..47450382)

Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene DDHD domain containing 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8399 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8400 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8401 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5752 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8402 Neighboring gene DDHD1 divergent transcript Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8403 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5753 Neighboring gene NANOG hESC enhancer GRCh37_chr14:53726964-53727525 Neighboring gene Sharpr-MPRA regulatory region 9489 Neighboring gene uncharacterized LOC105370504 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr14:53822218-53822978 Neighboring gene VISTA enhancer hs1151 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr14:53858219-53859418 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr14:53924665-53925864 Neighboring gene VISTA enhancer hs1629 Neighboring gene uncharacterized LOC124903316 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr14:54074633-54075832 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5754 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8404 Neighboring gene RPS3A pseudogene 46

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000014.9 Reference GRCh38.p14 Primary Assembly

    Range
    53169014..53242470
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007064168.1 RNA Sequence

  2. XR_001750966.2 RNA Sequence

  3. XR_001750965.1 RNA Sequence

  4. XR_007064169.1 RNA Sequence

  5. XR_007064170.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060938.1 Alternate T2T-CHM13v2.0

    Range
    47376754..47450382
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007084715.1 RNA Sequence

  2. XR_007084718.1 RNA Sequence

  3. XR_007084719.1 RNA Sequence

  4. XR_007084716.1 RNA Sequence

  5. XR_007084717.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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