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LOC105370466 uncharacterized LOC105370466 [ Homo sapiens (human) ]

Gene ID: 105370466, updated on 17-Sep-2024

Summary

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Gene symbol
LOC105370466
Gene description
uncharacterized LOC105370466
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105370466 in Genome Data Viewer
Location:
14q21.1
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 14 NC_000014.9 (40576121..40629962, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 14 NC_060938.1 (34766597..34820512, complement)

Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105370463 Neighboring gene uncharacterized LOC105370462 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr14:40795671-40796263 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr14:40816853-40817464 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr14:40817465-40818075 Neighboring gene uncharacterized LOC105370465 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr14:40916062-40917261 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr14:40934185-40934908 Neighboring gene MPRA-validated peak2137 silencer Neighboring gene uncharacterized LOC105370467 Neighboring gene NANOG hESC enhancer GRCh37_chr14:41328024-41328794 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr14:41423413-41423986 Neighboring gene H3K27ac hESC enhancer GRCh37_chr14:41423987-41424559 Neighboring gene long intergenic non-protein coding RNA 2315

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000014.9 Reference GRCh38.p14 Primary Assembly

    Range
    40576121..40629962 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_943790.3 RNA Sequence

  2. XR_943792.3 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060938.1 Alternate T2T-CHM13v2.0

    Range
    34766597..34820512 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007084643.1 RNA Sequence

  2. XR_007084644.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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