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G2E3-AS1 G2E3 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 105370431, updated on 10-Oct-2023

Summary

Official Symbol
G2E3-AS1provided by HGNC
Official Full Name
G2E3 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:53463
See related
Ensembl:ENSG00000257636 AllianceGenome:HGNC:53463
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
CAT1647; lincPRKD
Expression
Low expression observed in reference dataset See more
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Genomic context

Location:
14q12
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 14 NC_000014.9 (30437992..30577357, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 14 NC_060938.1 (24635815..24775174, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 14 NC_000014.8 (30907198..31046563, complement)

Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene ribosomal protein S6 pseudogene 24 Neighboring gene NANOG hESC enhancer GRCh37_chr14:30739699-30740200 Neighboring gene VISTA enhancer hs433 Neighboring gene Sharpr-MPRA regulatory region 11850 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5647 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr14:30833197-30833960 Neighboring gene uncharacterized LOC112267868 Neighboring gene uncharacterized LOC105370430 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr14:30942820-30944019 Neighboring gene uncharacterized LOC105370432 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8224 Neighboring gene SYF2 pre-mRNA splicing factor pseudogene 1 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr14:31090859-31092058 Neighboring gene G2/M-phase specific E3 ubiquitin protein ligase Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr14:31143443-31144642 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8226 Neighboring gene sec1 family domain containing 1 Neighboring gene NANOG hESC enhancer GRCh37_chr14:31161751-31162310 Neighboring gene ubiquitin conjugating enzyme E2 C pseudogene 1 Neighboring gene ribosomal protein L12 pseudogene 5

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_151720.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL117355, BX089820
    Related
    ENST00000552511.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000014.9 Reference GRCh38.p14 Primary Assembly

    Range
    30437992..30577357 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060938.1 Alternate T2T-CHM13v2.0

    Range
    24635815..24775174 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)