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LINC02748 long intergenic non-protein coding RNA 2748 [ Homo sapiens (human) ]

Gene ID: 105369427, updated on 17-Sep-2024

Summary

Official Symbol
LINC02748provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2748provided by HGNC
Primary source
HGNC:HGNC:54267
See related
AllianceGenome:HGNC:54267
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See LINC02748 in Genome Data Viewer
Location:
11q14.3
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (91157991..91228446)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (91079797..91150645)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (90891159..90961614)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene DISC1 fusion partner 1 Neighboring gene microRNA 1261 Neighboring gene ReSE screen-validated silencer GRCh37_chr11:90836591-90836792 Neighboring gene oxysterol binding protein like 9 pseudogene 2 Neighboring gene oxysterol binding protein like 9 pseudogene 3 Neighboring gene uncharacterized LOC107984371 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr11:91221826-91223025 Neighboring gene MPRA-validated peak1388 silencer Neighboring gene NANOG hESC enhancer GRCh37_chr11:91450108-91450694 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_21850 Neighboring gene H3K27ac hESC enhancer GRCh37_chr11:91531819-91532318 Neighboring gene long intergenic non-protein coding RNA 2756

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_183632.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AP003386, AP003485

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

    Range
    91157991..91228446
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060935.1 Alternate T2T-CHM13v2.0

    Range
    91079797..91150645
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)