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LOC105369416 uncharacterized LOC105369416 [ Homo sapiens (human) ]

Gene ID: 105369416, updated on 17-Sep-2024

Summary

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Gene symbol
LOC105369416
Gene description
uncharacterized LOC105369416
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105369416 in Genome Data Viewer
Location:
11q14.1
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (84594952..84608413)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (84531567..84545028)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene discs large MAGUK scaffold protein 2 Neighboring gene uncharacterized LOC124902729 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5355 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr11:83769989-83771188 Neighboring gene NANOG hESC enhancer GRCh37_chr11:83868528-83869174 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5356 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5357 Neighboring gene heterogeneous nuclear ribonucleoprotein A1 pseudogene 72 Neighboring gene NANOG hESC enhancer GRCh37_chr11:84384719-84385229 Neighboring gene uncharacterized LOC124902727 Neighboring gene ribosomal protein L9 pseudogene 22 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:84505287-84505788

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

    Range
    84594952..84608413
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007062820.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060935.1 Alternate T2T-CHM13v2.0

    Range
    84531567..84545028
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007082365.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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