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LOC105369161 uncharacterized LOC105369161 [ Homo sapiens (human) ]

Gene ID: 105369161, updated on 17-Sep-2024

Summary

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Gene symbol
LOC105369161
Gene description
uncharacterized LOC105369161
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105369161 in Genome Data Viewer
Location:
22q13.31
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 22 NC_000022.11 (46941916..46956082)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 22 NC_060946.1 (47431084..47450724)

Chromosome 22 - NC_000022.11Genomic Context describing neighboring genes Neighboring gene H3K27ac hESC enhancer GRCh37_chr22:47157594-47158428 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19251 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 13917 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19254 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19252 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19253 Neighboring gene TBC1D22A divergent transcript Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19255 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:47164922-47165802 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:47165803-47166681 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:47169021-47169535 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:47169536-47170051 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19257 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19258 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19259 Neighboring gene ReSE screen-validated silencer GRCh37_chr22:47179260-47179426 Neighboring gene TBC1 domain family member 22A Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19260 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19261 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:47194214-47194714 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19262 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19263 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19264 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:47210780-47211732 Neighboring gene ReSE screen-validated silencer GRCh37_chr22:47223143-47223301 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:47298559-47299204 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:47304205-47305098 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:47305099-47305992 Neighboring gene TBC1D22A antisense RNA 1 Neighboring gene H3K27ac hESC enhancer GRCh37_chr22:47310467-47310968 Neighboring gene H3K27ac hESC enhancer GRCh37_chr22:47310969-47311468 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19265 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19266 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr22:47330185-47331384 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:47331751-47332316 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:47345253-47345850 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:47345851-47346446 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:47361678-47362356 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:47378875-47379375 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:47389156-47389984 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:47395371-47395872 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:47395873-47396372 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19267 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:47411357-47411986 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:47411987-47412614 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:47424077-47424843 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:47426380-47426908 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:47426909-47427436 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:47427933-47428524 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:47441137-47441652 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:47442170-47442685 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:47447799-47448784 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:47448785-47449768 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:47451683-47452225 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19268 Neighboring gene uncharacterized LOC124905141 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:47462501-47463001 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:47485844-47486817 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:47510887-47511388 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:47511389-47511888 Neighboring gene uncharacterized protein UNQ6126/PRO20091

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000022.11 Reference GRCh38.p14 Primary Assembly

    Range
    46941916..46956082
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_938320.3 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060946.1 Alternate T2T-CHM13v2.0

    Range
    47431084..47450724
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007090729.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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