U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC105365426 alkylated DNA repair protein alkB homolog 8 [ Ceratosolen solmsi marchali ]

Gene ID: 105365426, updated on 10-Oct-2024

Summary

Go to the top of the page Help
Gene symbol
LOC105365426
Gene description
alkylated DNA repair protein alkB homolog 8
Gene type
protein coding
RefSeq status
MODEL
Organism
Ceratosolen solmsi marchali (sub-species: marchali)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Proctotrupomorpha; Chalcidoidea; Agaonidae; Agaoninae; Ceratosolen
Orthologs
fruit fly honey bee all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC105365426 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current CerSol_1.0 (GCF_000503995.1) Unplaced Scaffold NW_011948439.1 (334247..336876)

NW_011948439.1Genomic Context describing neighboring genes Neighboring gene alpha-protein kinase 1 Neighboring gene tetraspanin 2A Neighboring gene high mobility group protein DSP1-like Neighboring gene SIN3-associated polypeptide 30

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_011948439.1 Unplaced Scaffold Reference CerSol_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables S-adenosylmethionine-dependent methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA wobble uridine modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
alkylated DNA repair protein alkB homolog 8

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Ceratosolen solmsi marchali Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CerSol_1.0

Genomic

  1. NW_011948439.1 Reference CerSol_1.0

    Range
    334247..336876
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011503580.1 → XP_011501882.1  alkylated DNA repair protein alkB homolog 8

    UniProtKB/TrEMBL
    A0AAJ6YPM5
    Conserved Domains (3) summary
    pfam08241
    Location:386 → 476
    Methyltransf_11; Methyltransferase domain
    cl17169
    Location:36 → 113
    RRM_SF; RNA recognition motif (RRM) superfamily
    cl21496
    Location:189 → 311
    2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases