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LOC105346303 delta-sarcoglycan [ Magallana gigas (Pacific oyster) ]

Gene ID: 105346303, updated on 1-Aug-2024

Summary

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Gene symbol
LOC105346303
Gene description
delta-sarcoglycan
Locus tag
CGI_10006508
See related
EnsemblRapid:ENSBDJG00000012570
Gene type
protein coding
RefSeq status
MODEL
Organism
Magallana gigas
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Pteriomorphia; Ostreida; Ostreoidea; Ostreidae; Magallana
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Genomic context

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See LOC105346303 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_06 current xbMagGiga1.1 (GCF_963853765.1) 2 NC_088854.1 (30756826..30763868, complement)
102 previous assembly cgigas_uk_roslin_v1 (GCF_902806645.1) Linkage Group 7 NC_047565.1 (29605767..29612133, complement)

Chromosome 2 - NC_088854.1Genomic Context describing neighboring genes Neighboring gene spermatogenesis-associated protein 4 Neighboring gene kelch-like protein 8 Neighboring gene tumor suppressor candidate 3 Neighboring gene phosphoribosylformylglycinamidine synthase Neighboring gene Krueppel-like factor 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
delta-sarcoglycan
Names
zeta-sarcoglycan

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963853765.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference xbMagGiga1.1

Genomic

  1. NC_088854.1 Reference xbMagGiga1.1

    Range
    30756826..30763868 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011454822.4 → XP_011453124.3  delta-sarcoglycan

    UniProtKB/TrEMBL
    A0A8W8L0X2
    Related
    ENSBDJP00000016487.1, ENSBDJT00000018539.1
Nucleotide Protein
Heading Accession and Version

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