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LOC105343186 TGF-beta-activated kinase 1 and MAP3K7-binding protein 3 [ Magallana gigas (Pacific oyster) ]

Gene ID: 105343186, updated on 31-Jul-2024

Summary

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Gene symbol
LOC105343186
Gene description
TGF-beta-activated kinase 1 and MAP3K7-binding protein 3
Locus tag
CGI_10008373
See related
EnsemblRapid:ENSBDJG00000017688
Gene type
protein coding
RefSeq status
MODEL
Organism
Magallana gigas
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Pteriomorphia; Ostreida; Ostreoidea; Ostreidae; Magallana
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Genomic context

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See LOC105343186 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_06 current xbMagGiga1.1 (GCF_963853765.1) 9 NC_088861.1 (19203388..19215871, complement)
102 previous assembly cgigas_uk_roslin_v1 (GCF_902806645.1) Linkage Group 5 NC_047563.1 (37212613..37224711, complement)

Chromosome 9 - NC_088861.1Genomic Context describing neighboring genes Neighboring gene ADP-ribosylation factor-like protein 13B Neighboring gene transfer RNA leucine (anticodon UAA) Neighboring gene uncharacterized LOC117691949 Neighboring gene uncharacterized LOC105343187

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sodium molybdate does not inhibit sulfate-reducing bacteria but increases shell growth in the Pacific oyster Magallana gigas. Banker RMW, et al. PLoS One, 2022. PMID 35139090, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
TGF-beta-activated kinase 1 and MAP3K7-binding protein 3
Names
Mitogen-activated protein kinase kinase kinase 7-interacting protein 3-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963853765.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference xbMagGiga1.1

Genomic

  1. NC_088861.1 Reference xbMagGiga1.1

    Range
    19203388..19215871 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034476855.2 → XP_034332746.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 3 isoform X3

    UniProtKB/TrEMBL
    A0A8W8JCX8
    Conserved Domains (3) summary
    smart00547
    Location:671 → 693
    ZnF_RBZ; Zinc finger domain
    sd00029
    Location:671 → 690
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    cl21463
    Location:12 → 50
    UBA_like_SF; UBA domain-like superfamily

  2. XM_011450433.4 → XP_011448735.2  TGF-beta-activated kinase 1 and MAP3K7-binding protein 3 isoform X2

    UniProtKB/TrEMBL
    A0A8W8JCS0, A0A8W8JE98
    Related
    ENSBDJP00000023160.1, ENSBDJT00000025996.1
    Conserved Domains (4) summary
    TIGR02473
    Location:501 → 587
    flagell_FliJ; flagellar export protein FliJ
    smart00547
    Location:667 → 689
    ZnF_RBZ; Zinc finger domain
    sd00029
    Location:667 → 686
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    cl21463
    Location:12 → 50
    UBA_like_SF; UBA domain-like superfamily

  3. XM_034476853.2 → XP_034332744.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A8W8JCS0
    Conserved Domains (3) summary
    smart00547
    Location:671 → 693
    ZnF_RBZ; Zinc finger domain
    sd00029
    Location:671 → 690
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    cl21463
    Location:12 → 50
    UBA_like_SF; UBA domain-like superfamily

  4. XM_034476854.2 → XP_034332745.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A8W8JCS0
    Conserved Domains (3) summary
    smart00547
    Location:671 → 693
    ZnF_RBZ; Zinc finger domain
    sd00029
    Location:671 → 690
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    cl21463
    Location:12 → 50
    UBA_like_SF; UBA domain-like superfamily
Nucleotide Protein
Heading Accession and Version

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