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LOC105341520 centrosomal protein of 104 kDa [ Magallana gigas (Pacific oyster) ]

Gene ID: 105341520, updated on 31-Jul-2024

Summary

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Gene symbol
LOC105341520
Gene description
centrosomal protein of 104 kDa
See related
EnsemblRapid:ENSBDJG00000013842
Gene type
protein coding
RefSeq status
MODEL
Organism
Magallana gigas
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Pteriomorphia; Ostreida; Ostreoidea; Ostreidae; Magallana
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Genomic context

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See LOC105341520 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
31
Annotation release Status Assembly Chr Location
RS_2024_06 current xbMagGiga1.1 (GCF_963853765.1) 3 NC_088855.1 (35775093..35798551, complement)
102 previous assembly cgigas_uk_roslin_v1 (GCF_902806645.1) Linkage Group 6 NC_047564.1 (36486667..36513851, complement)

Chromosome 3 - NC_088855.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 85 Neighboring gene lisH domain-containing protein ARMC9 Neighboring gene U4atac minor spliceosomal RNA Neighboring gene DNA fragmentation factor subunit beta Neighboring gene protein DDI1 homolog 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
centrosomal protein of 104 kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963853765.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference xbMagGiga1.1

Genomic

  1. NC_088855.1 Reference xbMagGiga1.1

    Range
    35775093..35798551 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_066079480.1 → XP_065935552.1  centrosomal protein of 104 kDa isoform X7

    Related
    ENSBDJP00000018236.1, ENSBDJT00000020488.1

  2. XM_066079478.1 → XP_065935550.1  centrosomal protein of 104 kDa isoform X5

  3. XM_066079477.1 → XP_065935549.1  centrosomal protein of 104 kDa isoform X4

  4. XM_066079476.1 → XP_065935548.1  centrosomal protein of 104 kDa isoform X3

  5. XM_066079474.1 → XP_065935546.1  centrosomal protein of 104 kDa isoform X1

  6. XM_066079475.1 → XP_065935547.1  centrosomal protein of 104 kDa isoform X2

  7. XM_066079479.1 → XP_065935551.1  centrosomal protein of 104 kDa isoform X6

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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