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LOC105325734 uncharacterized LOC105325734 [ Magallana gigas (Pacific oyster) ]

Gene ID: 105325734, updated on 31-Jul-2024

Summary

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Gene symbol
LOC105325734
Gene description
uncharacterized LOC105325734
Locus tag
CGI_10009438
See related
EnsemblRapid:ENSBDJG00000008982
Gene type
protein coding
RefSeq status
MODEL
Organism
Magallana gigas
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Pteriomorphia; Ostreida; Ostreoidea; Ostreidae; Magallana
Also known as
chitS2
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Genomic context

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See LOC105325734 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
28
Annotation release Status Assembly Chr Location
RS_2024_06 current xbMagGiga1.1 (GCF_963853765.1) 6 NC_088858.1 (46555994..46578681)
102 previous assembly cgigas_uk_roslin_v1 (GCF_902806645.1) Linkage Group 3 NC_047561.1 (11116331..11139350, complement)

Chromosome 6 - NC_088858.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117689137 Neighboring gene chitin synthase chs-2 Neighboring gene probable helicase senataxin Neighboring gene RNA polymerase-associated protein RTF1 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sodium molybdate does not inhibit sulfate-reducing bacteria but increases shell growth in the Pacific oyster Magallana gigas. Banker RMW, et al. PLoS One, 2022. PMID 35139090, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables microfilament motor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-serine phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of actin filament length IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of myosin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC105325734
Names
Myosin-IIIB
putative chitin synthase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963853765.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference xbMagGiga1.1

Genomic

  1. NC_088858.1 Reference xbMagGiga1.1

    Range
    46555994..46578681
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011425423.4 → XP_011423725.3  uncharacterized protein LOC105325734

    Related
    ENSBDJP00000011686.1, ENSBDJT00000013196.1
Nucleotide Protein
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