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LOC105325334 uncharacterized LOC105325334 [ Magallana gigas (Pacific oyster) ]

Gene ID: 105325334, updated on 31-Jul-2024

Summary

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Gene symbol
LOC105325334
Gene description
uncharacterized LOC105325334
Locus tag
CGI_10012549
See related
EnsemblRapid:ENSBDJG00000014631
Gene type
protein coding
RefSeq status
MODEL
Organism
Magallana gigas
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Pteriomorphia; Ostreida; Ostreoidea; Ostreidae; Magallana
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Genomic context

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See LOC105325334 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_06 current xbMagGiga1.1 (GCF_963853765.1) 3 NC_088855.1 (21459409..21466712, complement)
102 previous assembly cgigas_uk_roslin_v1 (GCF_902806645.1) Linkage Group 6 NC_047564.1 (22474004..22481463, complement)

Chromosome 3 - NC_088855.1Genomic Context describing neighboring genes Neighboring gene glutathione S-transferase kappa 1 Neighboring gene uncharacterized LOC105325335 Neighboring gene uncharacterized LOC109618378 Neighboring gene uncharacterized LOC136273710 Neighboring gene uncharacterized LOC105325332

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sodium molybdate does not inhibit sulfate-reducing bacteria but increases shell growth in the Pacific oyster Magallana gigas. Banker RMW, et al. PLoS One, 2022. PMID 35139090, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC105325334

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963853765.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference xbMagGiga1.1

Genomic

  1. NC_088855.1 Reference xbMagGiga1.1

    Range
    21459409..21466712 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020065965.3 → XP_019921524.3  uncharacterized protein LOC105325334 isoform X1

    Related
    ENSBDJP00000019159.1, ENSBDJT00000021600.1

  2. XM_066078885.1 → XP_065934957.1  uncharacterized protein LOC105325334 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases