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LOC105316734 GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like [ Amphimedon queenslandica ]

Gene ID: 105316734, updated on 18-Sep-2024

Summary

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Gene symbol
LOC105316734
Gene description
GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like
See related
EnsemblRapid:LOC105316734
Gene type
protein coding
RefSeq status
MODEL
Organism
Amphimedon queenslandica
Lineage
Eukaryota; Metazoa; Porifera; Demospongiae; Heteroscleromorpha; Haplosclerida; Niphatidae; Amphimedon
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Genomic context

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See LOC105316734 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
102 current v1.0 (GCF_000090795.1) Unplaced Scaffold NW_003546264.1 (208061..209593, complement)

NW_003546264.1Genomic Context describing neighboring genes Neighboring gene 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial-like Neighboring gene F-box only protein 9-like Neighboring gene solute carrier family 12 member 9-like Neighboring gene ketosamine-3-kinase-like Neighboring gene mitochondrial ribonuclease P protein 3-like Neighboring gene serine/arginine-rich splicing factor 1-like Neighboring gene protein spinster homolog 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003546264.1 Unplaced Scaffold Reference v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GDP-Man:Man3GlcNAc2-PP-Dol alpha-1,2-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Amphimedon queenslandica Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v1.0 Primary Assembly

Genomic

  1. NW_003546264.1 Reference v1.0 Primary Assembly

    Range
    208061..209593 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011411867.2 → XP_011410169.1  GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like

    UniProtKB/TrEMBL
    A0A1X7VJZ7
    Related
    XP_011410169.1, XM_011411867.2
    Conserved Domains (2) summary
    cd03806
    Location:30 → 447
    GT1_ALG11_like; This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown ...
    PLN02949
    Location:3 → 458
    PLN02949; transferase, transferring glycosyl groups
Nucleotide Protein
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