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LOC105314922 aspartyl/asparaginyl beta-hydroxylase-like [ Amphimedon queenslandica ]

Gene ID: 105314922, updated on 7-Dec-2023

Summary

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Gene symbol
LOC105314922
Gene description
aspartyl/asparaginyl beta-hydroxylase-like
See related
EnsemblRapid:LOC105314922
Gene type
protein coding
RefSeq status
MODEL
Organism
Amphimedon queenslandica
Lineage
Eukaryota; Metazoa; Porifera; Demospongiae; Heteroscleromorpha; Haplosclerida; Niphatidae; Amphimedon
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Genomic context

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See LOC105314922 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
102 current v1.0 (GCF_000090795.1) Unplaced Scaffold NW_003547490.1 (825..3142, complement)

NW_003547490.1Genomic Context describing neighboring genes Neighboring gene ATP-dependent RNA helicase DDX54-like Neighboring gene uncharacterized LOC109588133 Neighboring gene ATP-dependent RNA helicase DDX54-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003547490.1 Unplaced Scaffold Reference v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptidyl-aspartic acid 3-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-aspartic acid hydroxylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aspartyl/asparaginyl beta-hydroxylase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Amphimedon queenslandica Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v1.0 Primary Assembly

Genomic

  1. NW_003547490.1 Reference v1.0 Primary Assembly

    Range
    825..3142 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011409356.2 → XP_011407658.2  aspartyl/asparaginyl beta-hydroxylase-like

    UniProtKB/TrEMBL
    A0A1X7TFM1
    Related
    XP_011407658.2, XM_011409356.2
    Conserved Domains (2) summary
    COG0457
    Location:186 → 361
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:263 → 289
    TPR; TPR repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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