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LOC105314839 exostosin-like 2 [ Amphimedon queenslandica ]

Gene ID: 105314839, updated on 10-Oct-2024

Summary

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Gene symbol
LOC105314839
Gene description
exostosin-like 2
See related
EnsemblRapid:LOC105314839
Gene type
protein coding
RefSeq status
MODEL
Organism
Amphimedon queenslandica
Lineage
Eukaryota; Metazoa; Porifera; Demospongiae; Heteroscleromorpha; Haplosclerida; Niphatidae; Amphimedon
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Genomic context

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See LOC105314839 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
102 current v1.0 (GCF_000090795.1) Unplaced Scaffold NW_003547295.1 (1480..3021)

NW_003547295.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109587726 Neighboring gene uncharacterized LOC109587725

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003547295.1 Unplaced Scaffold Reference v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
exostosin-like 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Amphimedon queenslandica Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v1.0 Primary Assembly

Genomic

  1. NW_003547295.1 Reference v1.0 Primary Assembly

    Range
    1480..3021
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011409229.1 → XP_011407531.1  exostosin-like 2

    UniProtKB/TrEMBL
    A0AAN0IRU4
    Related
    XP_011407531.1, XM_011409229.1
    Conserved Domains (1) summary
    pfam09258
    Location:83 → 307
    Glyco_transf_64; Glycosyl transferase family 64 domain
Nucleotide Protein
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