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CHPT1 choline phosphotransferase 1 [ Pteropus vampyrus (large flying fox) ]

Gene ID: 105310595, updated on 30-Mar-2024

Summary

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Gene symbol
CHPT1
Gene description
choline phosphotransferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus vampyrus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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See CHPT1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
101 current Pvam_2.0 (GCF_000151845.1) Unplaced Scaffold NW_011888797.1 (2277090..2313785)

NW_011888797.1Genomic Context describing neighboring genes Neighboring gene Spi-C transcription factor Neighboring gene myosin binding protein C1 Neighboring gene synaptonemal complex protein 3 Neighboring gene N-acetylglucosamine-1-phosphate transferase subunits alpha and beta Neighboring gene 5S ribosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011888797 Unplaced Scaffold Reference Pvam_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables diacylglycerol cholinephosphotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ethanolaminephosphotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylethanolamine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cholinephosphotransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus vampyrus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pvam_2.0

Genomic

  1. NW_011888797.1 Reference Pvam_2.0

    Range
    2277090..2313785
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011386754.2 → XP_011385056.1  cholinephosphotransferase 1 isoform X1

    See identical proteins and their annotated locations for XP_011385056.1

    UniProtKB/TrEMBL
    A0A6P3S4G6

  2. XM_011386764.2 → XP_011385066.1  cholinephosphotransferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A6P3S4H6

RNA

  1. XR_897524.2 RNA Sequence

  2. XR_002779024.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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