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SLC5A1 solute carrier family 5 member 1 [ Pteropus vampyrus (large flying fox) ]

Gene ID: 105308336, updated on 18-Sep-2024

Summary

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Gene symbol
SLC5A1
Gene description
solute carrier family 5 member 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus vampyrus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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See SLC5A1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
101 current Pvam_2.0 (GCF_000151845.1) Unplaced Scaffold NW_011889349.1 (111859..168073, complement)

NW_011889349.1Genomic Context describing neighboring genes Neighboring gene immunoglobulin lambda variable 6-57-like Neighboring gene solute carrier family 5 member 4 Neighboring gene 5S ribosomal RNA Neighboring gene galectin-3 pseudogene Neighboring gene uncharacterized LOC105308337

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011889349 Unplaced Scaffold Reference Pvam_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-glucose:sodium symporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in sodium ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sodium/glucose cotransporter 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus vampyrus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pvam_2.0

Genomic

  1. NW_011889349.1 Reference Pvam_2.0

    Range
    111859..168073 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011384256.1 → XP_011382558.1  sodium/glucose cotransporter 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P3RZM1
    Conserved Domains (1) summary
    cl00456
    Location:28 → 663
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

  2. XM_023525523.1 → XP_023381291.1  sodium/glucose cotransporter 1 isoform X2

    UniProtKB/TrEMBL
    A0A6P6C1L8
    Conserved Domains (1) summary
    cl00456
    Location:1 → 534
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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