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TECTA tectorin alpha [ Pteropus vampyrus (large flying fox) ]

Gene ID: 105307910, updated on 30-Mar-2024

Summary

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Gene symbol
TECTA
Gene description
tectorin alpha
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus vampyrus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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See TECTA in Genome Data Viewer
Location:
chromosome: Un
Exon count:
23
Annotation release Status Assembly Chr Location
101 current Pvam_2.0 (GCF_000151845.1) Unplaced Scaffold NW_011889309.1 (1660698..1725884, complement)

NW_011889309.1Genomic Context describing neighboring genes Neighboring gene sortilin related receptor 1 Neighboring gene 5S ribosomal RNA Neighboring gene sterol-C5-desaturase Neighboring gene tubulin folding cofactor E like Neighboring gene 5S ribosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011889309 Unplaced Scaffold Reference Pvam_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-matrix adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-tectorin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus vampyrus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pvam_2.0

Genomic

  1. NW_011889309.1 Reference Pvam_2.0

    Range
    1660698..1725884 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011383588.1 → XP_011381890.1  alpha-tectorin

    UniProtKB/TrEMBL
    A0A6P3RYK4
    Conserved Domains (10) summary
    smart00216
    Location:703 → 865
    VWD; von Willebrand factor (vWF) type D domain
    smart00241
    Location:1808 → 2062
    ZP; Zona pellucida (ZP) domain
    smart00539
    Location:98 → 254
    NIDO; Extracellular domain of unknown function in nidogen (entactin) and hypothetical proteins
    smart00832
    Location:517 → 591
    C8; This domain contains 8 conserved cysteine residues
    pfam00094
    Location:322 → 478
    VWD; von Willebrand factor type D domain
    pfam00100
    Location:1940 → 2060
    Zona_pellucida; Zona pellucida-like domain
    pfam01826
    Location:597 → 650
    TIL; Trypsin Inhibitor like cysteine rich domain
    pfam08742
    Location:1298 → 1368
    C8; C8 domain
    pfam14670
    Location:2092 → 2124
    FXa_inhibition; Coagulation Factor Xa inhibitory site
    cl17735
    Location:652 → 706
    VWC; von Willebrand factor type C domain
Nucleotide Protein
Heading Accession and Version

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