U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

GALNT6 polypeptide N-acetylgalactosaminyltransferase 6 [ Pteropus vampyrus (large flying fox) ]

Gene ID: 105307019, updated on 30-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
GALNT6
Gene description
polypeptide N-acetylgalactosaminyltransferase 6
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus vampyrus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See GALNT6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
101 current Pvam_2.0 (GCF_000151845.1) Unplaced Scaffold NW_011889252.1 (866029..897686)

NW_011889252.1Genomic Context describing neighboring genes Neighboring gene sodium voltage-gated channel alpha subunit 8 Neighboring gene solute carrier family 4 member 8 Neighboring gene 5S ribosomal RNA Neighboring gene 5S ribosomal RNA Neighboring gene chymotrypsin like elastase 1 Neighboring gene bridging integrator 2

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_011889252 Unplaced Scaffold Reference Pvam_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
polypeptide N-acetylgalactosaminyltransferase 6

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Pteropus vampyrus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pvam_2.0

Genomic

  1. NW_011889252.1 Reference Pvam_2.0

    Range
    866029..897686
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011382359.2 → XP_011380661.1  polypeptide N-acetylgalactosaminyltransferase 6 isoform X1

    See identical proteins and their annotated locations for XP_011380661.1

    UniProtKB/TrEMBL
    A0A6P3RW27
    Conserved Domains (4) summary
    cd02510
    Location:180 → 485
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:499 → 621
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:497 → 619
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
    pfam10111
    Location:180 → 444
    Glyco_tranf_2_2; Glycosyltransferase like family 2

  2. XM_011382361.2 → XP_011380663.1  polypeptide N-acetylgalactosaminyltransferase 6 isoform X2

    UniProtKB/TrEMBL
    A0A6P3RP68
    Conserved Domains (4) summary
    cd02510
    Location:180 → 485
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:499 → 571
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:497 → 570
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
    pfam10111
    Location:180 → 444
    Glyco_tranf_2_2; Glycosyltransferase like family 2

  3. XM_011382362.2 → XP_011380664.1  polypeptide N-acetylgalactosaminyltransferase 6 isoform X3

    UniProtKB/TrEMBL
    A0A6P3RFP4
    Conserved Domains (3) summary
    cd02510
    Location:180 → 485
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:499 → 535
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam10111
    Location:180 → 444
    Glyco_tranf_2_2; Glycosyltransferase like family 2

  4. XM_011382360.2 → XP_011380662.1  polypeptide N-acetylgalactosaminyltransferase 6 isoform X1

    See identical proteins and their annotated locations for XP_011380662.1

    UniProtKB/TrEMBL
    A0A6P3RW27
    Conserved Domains (4) summary
    cd02510
    Location:180 → 485
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:499 → 621
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:497 → 619
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
    pfam10111
    Location:180 → 444
    Glyco_tranf_2_2; Glycosyltransferase like family 2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.