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DUS1L dihydrouridine synthase 1 like [ Pteropus vampyrus (large flying fox) ]

Gene ID: 105301129, updated on 30-Mar-2024

Summary

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Gene symbol
DUS1L
Gene description
dihydrouridine synthase 1 like
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus vampyrus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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See DUS1L in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
101 current Pvam_2.0 (GCF_000151845.1) Unplaced Scaffold NW_011889008.1 (737815..747304)

NW_011889008.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 57 Neighboring gene 5S ribosomal RNA Neighboring gene fatty acid synthase Neighboring gene uncharacterized LOC105301133 Neighboring gene G protein pathway suppressor 1 Neighboring gene RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011889008 Unplaced Scaffold Reference Pvam_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables flavin adenine dinucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA dihydrouridine synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus vampyrus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pvam_2.0

Genomic

  1. NW_011889008.1 Reference Pvam_2.0

    Range
    737815..747304
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023538620.1 → XP_023394388.1  tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like isoform X4

    UniProtKB/TrEMBL
    A0A6P6D422
    Conserved Domains (2) summary
    cd02801
    Location:23 → 283
    DUS_like_FMN; Dihydrouridine synthase-like (DUS-like) FMN-binding domain. Members of this family catalyze the reduction of the 5,6-double bond of a uridine residue on tRNA. Dihydrouridine modification of tRNA is widely observed in prokaryotes and eukaryotes, and also ...
    cl27070
    Location:429 → 464
    DUF702; Domain of unknown function (DUF702)

  2. XM_023538616.1 → XP_023394384.1  tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like isoform X1

    UniProtKB/TrEMBL
    A0A6P6D3U0
    Conserved Domains (2) summary
    cd02801
    Location:45 → 305
    DUS_like_FMN; Dihydrouridine synthase-like (DUS-like) FMN-binding domain. Members of this family catalyze the reduction of the 5,6-double bond of a uridine residue on tRNA. Dihydrouridine modification of tRNA is widely observed in prokaryotes and eukaryotes, and also ...
    cl27070
    Location:451 → 486
    DUF702; Domain of unknown function (DUF702)

  3. XM_023538619.1 → XP_023394387.1  tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like isoform X3

    UniProtKB/TrEMBL
    A0A6P6D4B8
    Conserved Domains (2) summary
    cd02801
    Location:45 → 266
    DUS_like_FMN; Dihydrouridine synthase-like (DUS-like) FMN-binding domain. Members of this family catalyze the reduction of the 5,6-double bond of a uridine residue on tRNA. Dihydrouridine modification of tRNA is widely observed in prokaryotes and eukaryotes, and also ...
    cl27070
    Location:412 → 447
    DUF702; Domain of unknown function (DUF702)

  4. XM_023538621.1 → XP_023394389.1  tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like isoform X5

    UniProtKB/TrEMBL
    A0A6P3QXB6
    Conserved Domains (1) summary
    cd02801
    Location:18 → 278
    DUS_like_FMN; Dihydrouridine synthase-like (DUS-like) FMN-binding domain. Members of this family catalyze the reduction of the 5,6-double bond of a uridine residue on tRNA. Dihydrouridine modification of tRNA is widely observed in prokaryotes and eukaryotes, and also ...

  5. XM_011373664.1 → XP_011371966.1  tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like isoform X5

    See identical proteins and their annotated locations for XP_011371966.1

    UniProtKB/TrEMBL
    A0A6P3QXB6
    Conserved Domains (1) summary
    cd02801
    Location:18 → 278
    DUS_like_FMN; Dihydrouridine synthase-like (DUS-like) FMN-binding domain. Members of this family catalyze the reduction of the 5,6-double bond of a uridine residue on tRNA. Dihydrouridine modification of tRNA is widely observed in prokaryotes and eukaryotes, and also ...

  6. XM_011373665.1 → XP_011371967.1  tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like isoform X5

    See identical proteins and their annotated locations for XP_011371967.1

    UniProtKB/TrEMBL
    A0A6P3QXB6
    Conserved Domains (1) summary
    cd02801
    Location:18 → 278
    DUS_like_FMN; Dihydrouridine synthase-like (DUS-like) FMN-binding domain. Members of this family catalyze the reduction of the 5,6-double bond of a uridine residue on tRNA. Dihydrouridine modification of tRNA is widely observed in prokaryotes and eukaryotes, and also ...

  7. XM_023538617.1 → XP_023394385.1  tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like isoform X2

    UniProtKB/TrEMBL
    A0A6P6D592
    Conserved Domains (1) summary
    cd02801
    Location:18 → 250
    DUS_like_FMN; Dihydrouridine synthase-like (DUS-like) FMN-binding domain. Members of this family catalyze the reduction of the 5,6-double bond of a uridine residue on tRNA. Dihydrouridine modification of tRNA is widely observed in prokaryotes and eukaryotes, and also ...
Nucleotide Protein
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