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LAMB1 laminin subunit beta 1 [ Pteropus vampyrus (large flying fox) ]

Gene ID: 105300344, updated on 30-Mar-2024

Summary

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Gene symbol
LAMB1
Gene description
laminin subunit beta 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus vampyrus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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See LAMB1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
34
Annotation release Status Assembly Chr Location
101 current Pvam_2.0 (GCF_000151845.1) Unplaced Scaffold NW_011888989.1 (1305915..1373173)

NW_011888989.1Genomic Context describing neighboring genes Neighboring gene neuronal cell adhesion molecule Neighboring gene 5S ribosomal RNA Neighboring gene laminin subunit beta 4 Neighboring gene 5S ribosomal RNA Neighboring gene vimentin pseudogene Neighboring gene dihydrolipoamide dehydrogenase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011888989 Unplaced Scaffold Reference Pvam_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables extracellular matrix structural constituent IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables integrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in basement membrane assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in substrate adhesion-dependent cell spreading IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of laminin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
laminin subunit beta-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus vampyrus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pvam_2.0

Genomic

  1. NW_011888989.1 Reference Pvam_2.0

    Range
    1305915..1373173
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023537984.1 → XP_023393752.1  laminin subunit beta-1

    UniProtKB/TrEMBL
    A0A6P6D2H1
    Conserved Domains (5) summary
    smart00180
    Location:772 → 817
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    cd00055
    Location:509 → 548
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    pfam00053
    Location:820 → 868
    Laminin_EGF; Laminin EGF domain
    pfam00055
    Location:44 → 269
    Laminin_N; Laminin N-terminal (Domain VI)
    cl25732
    Location:1189 → 1770
    SMC_N; RecF/RecN/SMC N terminal domain
Nucleotide Protein
Heading Accession and Version

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